When posting the Automatic payment journal generated from the VAT return it disgregards

any Reverse charge codes,  both domestic and EU and leaves a balance in the Sales and

Purchase Tax Control Accounts  2200 & 2201

Do we need to adjust this manually to clear control accounts ?

I spoke to Sage and they said you leave the figures as they are in the VAT transfer wizard.  But we cgange from Cash VAT to Standard VAT as of the 1st March our new FY and the ibstructions from Sage says to enter new adjusted values from VAT return in the VAT return journal overwriting the automated figured that Sage had which I have been doing.  So confused.