Set up two seperate payroll accounts for remittances

My client has two payroll identifiers, one with reduced rate EI for employees participating in group insurance.  I have set up the RP0001 and RP0002 as job categories for reporting purposes, but have always processed remittances and T4's manually because all of the two seperate identifiers.  Just wondering if anyone has had success creating two payroll accounts for making remittances easier (ie, Receiver General RP0001 and Receiver General RP0002, CPP 1 and CPP 2 etc).  I think it can probably be done but before I go in and add new payroll exp/liability accts and change the corresponding employee linked accounts and go through the hassle of setting it all up, would like to know if anyone has done this successfully or whether the linked accounts field in settings will even let me do this.

TIA