Aiwasse- BusinessWorks does not allow negative deposits.  You can do a transaction for the deposit for the amount you actually received.  You would then need to do a separate transaction for the refund transactions.  If you feel you need additional assistance with this, I would recommend you call 800-447-5700 and create a case to work with a technical support analyst.  Thanks, Coleen 

Thank you Coleen.  I ended up posting the receipts for the inbound payments, not doing a bank deposit, but rather a bank transaction without posting to the GL.  It SEEMED to have worked.  Time will tell.  Thanks again!!