If you are just trying to clean up this one record, it can be done in Data File Display and Maintenance.  Key in the file name (or use the folder lookup to find the file for that company) JT_DailyTimeEntry.  Correct the Employee Department and Employee Number, or delete the transaction. 

Unfortunately JobOps didn't do a very good job of naming files in the old version that we're using, 4.40 Release 2, and there is not a file named JT_DailyTimeEntry.  I've located on named JT_d1xxx.soa, where 'xxx' is the company name.  Could that one possibly be the offending record?  

So JT_d1xxx.soa contained the offending record.  I used Data File Display and Maintenance, deleted the offending records and was able to run the Daily Labor Register /Update with no issue. 

I missed that you were in a very old v4.40 version; in your subject.  JobOps (Operations Management) did not move to business framework until a later version where normalized table names were adopted.  Unfortunately, I don't have any old versions to confirm the data tables.  You may need to work with our Sage Consutant for assistance.